Input sequence file
Or paste sequences
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Blank,tab and digit sequence-character options
Check if digit characters exist?
Yes
No
Check if blank or tab characters exist?
Yes
No
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Valid sequence-character options
Check for specific characters?
Yes
No
If Yes,
Select a valid character set to use
If User-defined type,
Enter the name of file containing valid characters:
Or directly enter valid characters:
Are letters case sensitive?
Yes
No
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Compostional analysis options
Perform special DNA analysis?
Yes
No
Treat upper and lowercase letters as different?
Yes
No
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Definition line format options
Maximum length of definition line
Add the sequence length to each definition line?
Yes
No
Add CG percentage to each definition line?
Yes
No
Add uppercase ATCG percent to definition line?
Yes
No
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Sequence line format options
Maximum length of sequence line
Change the letter cases?
No change
to uppercase
to lowercase
Insert position count at start of each line?
Yes
No
Insert blank after every
characters?
Yes
No
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Sequence filter options
Delete sequences with <
characters?
Yes
No
Delete sequences with >
characters?
Yes
No
Delete sequences with <
% ATCG?
Yes
No
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