Bioinformatics & Genomics
Genomic & DNA
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[Osaka University] A human and mouse gene expression data bank, collecting quantitative and qualitative information on gene expression.
dbEST: Expressed Sequence Tags database
[The National Center for Biotechnology Information] dbEST is a division of GenBank that contains sequence data and other information on “single-pass” cDNA sequences, or Expressed Sequence Tags, from a number of organisms.
[National Center for Biotechnology Information] A public database of genome survey sequences including contact information about the contributors, experimental conditions, and genetic map locations.
[National Center for Biotechnology Information] A public database that contains sequence and mapping data on short genomic landmark sequences or sequence tagged sites.
EGAD: Expressed Gene Anatomy Database
[The Institute for Genomic Research] A collection of human transcript sequences from extracting and curating sequences from GenBank, creating a non-redundant set of human transcript (HT) sequences.
[EMBL, EBI, Sanger Institute] (Human Genome Server) Ensembl is a joint project between EMBL – EBI and the Sanger Institute to develop a software system which produces and maintains automatic annotation on eukaryotic genomes.
[Walter Gilbert Laboratory, Harvard] The EID is an exhaustive database of protein-coding intron-containing genes.
GDB: The Genome Database
[Johns Hopkins Univ.] A international collaboration on the Human Genome Project.
Gene Map of the Human Genome
[National Center for Biotechnology Information] Chromosome maps of the human genome.
[Weizmann Institute of Science ] GeneCards is a database of human genes, their products and their involvement in diseases. It offers concise information about the functions of all human genes that have an approved symbol, as well as selected others.
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Genome Sequencing Center Jena
[Institute of Molecular Biotechnology] The purpose of the Genome Sequencing Center is to further the knowledge of genomes, particularly
the human genome, through large scale sequencing and genetic
analysis. Data from human, mouse, Dictyostelium (amoeba), and bacterial genomes are available.
[GEN Research Institute & Human Genome Center] A human cDNA database achieved through a large-scale human cDNA analysis project containing sequence information and data concerning chromosomal localizations and expression patterns.
HGMD: Human Gene Mutation Database
[Institute of Medical Genetics in Cardiff] Represents an attempt to collate known (published) gene lesions responsible for human inherited disease comprised of various types of mutation within the coding regions of human nuclear genes.
HIV Sequence Database
[Los Alamos National Lab] This database currently contains nucleotide sequences that have appeared in the current and all previous annual editions of Human Retroviruses and AIDS in both GenBank and EMBL formats, as well as protein translations of the coding regions.
HPV Sequence Database
[Los Alamos National Laboratory] The Human Papillomaviruses Database collects, curates, analyzes, and publishes genetic sequences of papillomaviruses and related cellular proteins.
[InfoBiogen] HuGeMap is a database that contains the genetic maps from G�n�thon and Cooperative Human Linkage Center, and the physical maps from CEPH/G�n�thon and the Whitehead Institute-MIT.
Influenza Sequence Database
[Los Alamos National Laboratory] A curated database of nucleotide and amino acid sequences intended to provide an easy sequence deposit and retrieval capabilities to the analysis of hemagglutinin and neuraminidase sequences.
Integrated X Chromosome Database
[Max-Planck-Institute for Molecular Genetics] Includes DNA classes, clones, genes, STS, EST, probes, cDNA, chromoband, and collections for X chromosome sequencing.
[Incyte Gemomics] LifeSeq provides fee access to Incyte’s human gene sequence databases, complete with integrated bioinformatics tools.
[Center for Molecular Medicine, Emory Univ. School of Medicine] A human mitochondrial genome database.
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[B�roud and Soussi] The p53 gene and its many mutations are found on this database. It includes tools for analysis of p53 mutations and carcinogenesis.
STS-Based Map of the Human Genome
[Whitehead Institute/MIT Center for Genome Research] This site contains YAC-contig maps anchored to genetic, radiation hybrid, and integrated maps; and lists of all STSs assigned to chromosome and radiation hybrid maps.
The genetic maps displayed at this site now reflect the final Genethon genetic linkage map of the genome published in Nature.
Telethon Institute of Genetics and Medicine
[TigemNet] TIGEM is the Telethon Institute of Genetics and
Medicine, founded in 1994, an initiative of the
Comitato Promotore Telethon, who decided to
create a centre of excellence active in the field of
disease gene identification
[GBF] A database program that compiles data about gene regulatory DNA sequences; from this data programs have been developed to identify putative promoter or enhancer structures.
UDB: The Unified Database for Human Genome Mapping
[WISGB] The UDB presents an integrated map for each human chromosome, based on
data integrated from various radiation hybrid, linkage and physical mapping resources. The
integrated map currently includes genes, STSs, and EST clusters.
[NCBI] UniGene is an experimental systerm for automatically partitioning GenBank sequences into a non-redundant set of gene-oriented clusters. Each UniGene cluster contains sequences that represent a unique gene, as well as related information such as the tissue types in which the gene has been expressed and map location. Additionally, expressed sequence tag (EST) sequences have been included.