Internet Resources

 
Bioinformatics & Genomics


 
Protein Structure



 
Secondary Structure Prediction & Assignment




 
EMBL & Rost Methods




 
Secondary Structure Assignment

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Database of Secondary Structure in Proteins
[EBI] (DSSP) The DSSP database is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB).

[more info][12257]

DDL – Drug Design Laboratory
[Milan University, Italy] This site presents downloadable programs for drug design, including molecular dynamics for solvated molecules, program Predator to predict secondary structure of proteins, and molecular orbital calculations.

[more info][13641]

DSSP Source Code
[CMBI] “The DSSP database is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB).”



[more info][12258]

STRIDE Documentation
[EMBL] STRIDE provides knowledge-based protein secondary structure assignment from atomic coordinates.




[more info][12256]