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Sequence Composition Options

Sequence for shuffling or sequence-based probability distribution

                      Input sequence file        
                      Or paste a sequence (do not include definition line)
                    

Are you shuffling a sequence?              Yes         No

If Yes, enter a sequence above, give the following two parameters and then  
             Number of sequences to generate (1 - 10000)     
             Sequence line length in FASTA output (10 - 999)                          

Otherwise, choose a sequence type and base or amino acid probability distribution

Protein Amino Acid Probability Distribution
begin with methionine uniform user-defined Swiss-Prot
DNA Base Probability Distribution
begin with ATG codon uniform user-defined
RNA     Base Probability Distribution
   begin with AUG codon uniform user-defined
Input Sequence (probabilities calculated from sequence entered above)

User-defined Probability Percentages
A  | A  | ALA
C  | C  | ARG
G  | G  | ASN
T  | U  | ASP

   CYS

   GLN

   GLU

   GLY

   HIS

   ILE

   LEU

   LYS

   MET

   PHE

   PRO

   SER

   THR

   TRP

   TYR

   VAL




Sequence Number and Length Options

                      Number of sequences to generate (1 - 10000)     
                      Sequence line length in FASTA output (10 - 999)

                      Sequence Length (10 - 4000)
same as input sequence (applies only to input-sequence-based generation)
constant length length:
randomly distributed   from   to
normally distributed mean:  standard deviation: