Computational & Web Resources
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[EMBL] The Biocatalog is a software directory of general interest
in molecular biology and genetics. The full database is downloadable (text file).
[CAChe Group] BioMedCAChe is the new computer-aided chemistry software package designed specifically for bio- and medicinal chemists. The package aids researchers in discovering structure-activity relationships, optimizing leads by maximizing activity, and improving the prediction of bioavailability.
[The Bioperl Project] Software package for computational molecular biology.
[Aalborg University] This Blocking Gibbs Sampling for Pedigree (Linkage) Analysis in Very Large Pedigrees program is for linkage analysis of large complex pedigrees.
[Institut National de la Recherche Agronomique] A program for use in plasmid cloning to quickly find in frame deletions, sub-cloning, and frameshift strategies.
[Compugen] An algorithm for searching protein databases with DNA queries, based on Smith-Waterman. FramePlus independently and simultaneously models frame shifts and codon gaps.
[Caltech] This program runs simulation programs of different neural systems.
JamBW 1.1: Java Based Molecular Biologist's Workbench
[EMBL] A collection of programs designed to exploit the most common bioinformatic operations that a molecular biologist currently has, including manipulation and analysis of DNA sequences.
JaMBW: Java Based Molecular Biologist's Workbench
[EMBL-Heidelberg] A set of tools for free access to the the most common bioinformatic operations that a molecular biologist currently has.
The Microbiology Network
Molecular Biology and Biotechnology File Archive.
These files include standard shareware
programs of interest to the microbiologist,
programs designed by individual investigators,
text files in specialized interest, and
demonstration programs supplied by vendors.