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Transmembrane Prediction

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2nd Window Opens resource in a 2nd browser window.

2nd Window OrienTM algorithm
[Protein Engineering Journal] A novel tool for the prediction of transmembrane protein topology based on a statistical analysis of the SwissProt database: the OrienTM algorithm
[more info][12604]

2nd Window PSIPRED
[Brunel University] "The PSIPRED protein structure prediction server allows you to submit a protein sequence, perform a prediction of your choice, and receive the results of the prediction via E-mail. You may select one of three prediction methods to apply to your sequence: PSIPRED - a highly accurate secondary structure prediction method, MEMSAT 2 - a new version of our widely used transmembrane topology prediction method, and GenTHREADER - a new sequence profile based fold recognition method."
[more info][12282]

2nd Window SOSUI
[Tokyo University] A tool for secondary structure prediction of membrane proteins from a protein sequence.
[more info][10516]

2nd Window TMAP
[Karolinska Institutet] Tool for prediction of transmembrane segments in proteins.
[more info][10517]

2nd Window TMHMM v.1.0
[CBS] Predicts transmembrane helices in proteins.
[more info][10518]

2nd Window TMpred
[ISREC] Predicts transmembrane regions and orientation using a combination of several weight-matrices.
[more info][10519]


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